Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858126.1_cds_XP_016513751.1_26265
CDS Infomation

[gene=LOC107830640] [db_xref=GeneID:107830640] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016513751.1] [location=complement(30184..31641)] [gbkey=CDS]
Sequence

ATGGAAGGGCATACAGGACAACAAGAGGAGCTATTTGCAGAAATTGATCAAAAAACAGAT
GATCAAGCATTCAGTGATGGTGAAGCAGCTTCCTGTACCACAGATGGTAATGAAATAGTG
AATATTGTCATAGCAGATCCAATTTTGCAAGCAGACTCTATGCCAAGAGAATATACATAC
TCGTGGAGAAGACGAATTCAGAAAGTTTTACCCCTGCTGAAGATGGATGAATACAACAGG
CACGAGTATGATCCAAAGGTAGTTTCATTGGGACCTTATCACCATGGTAAACCAGAGCTG
CAGCTAGCAGAGGATTTCAAGCATATAGCCCTTGAAATGTTTGTCTCAGGTAGTAGCAAG
GACGTAGCTTATTTCTATAACAAGATACTAGAAGTTGTTGACAATGCAAGAAATTGTTAT
GTTGATGGCTCCACGGACAAGTACAATGATCATGAATTTTCCTTAATGATGCTTCTTGAT
GCCTGCTTTATTATCAACCACATCGAGCTTAGCACATCGGATAGGTATAACAAACTCAGA
ACCACCAGGCACCATCTTGGAATGTTGGCGTTATCAACAACAGTTCGAGACATGTTTTTA
CTTGAGAATCAAATTCCTTTTTGGATCTTGAAACTCTTGATCAGCTTACGATATGACAAG
GATGAAGGAGTAGAATTGCTCGAGATGTTCTTGAATTTCACCCTCTTTGGTGAATATGAT
AAAAAAGGTGAAATGAGTTACAAACATGCAGAAGAACCTCTGCATCTTCTTGAAGCATTT
AGAACAAGACTTGTCTCACAACACAGTGAAGTCAGGAATTTGCATCGTACTTGCACACCT
CAATGGCTCAAAAGGAAGAAAAGTATTTGCAATGACCGCGCTAATATGAAAAGTTACATT
CACTCCTTTCGTTCGGTCACTGATCTCAAAGCTAAGGGAATTTACTTCAGGCCTAGCTGT
ACTCATTCATTGAAGGACATAAAATTCAAATCAAGATACTTCTATGGCCAGCTTGAACTT
CCAACTTGGTATGTTTCTATCTACACAAAGGCATTCTTCTTGAACATGATAGCCTATGAG
ATGTGCCCAAATACTGTTACTGATCGTGCTGTGACATCGTACGTATACTTCATGAAGTCG
CTAATCGAGAGCCCCAGGGATGTAAAAGAACTACGCGAAAAACAGATACTATTCAACATG
CTTGGGAGCGATGAGGAAGTGGCAAGAATGTACAAGGAGATCAATACTTATGGAGTGAAC
AATGCGCACATTTTCTACAATGTGAAAGAAAAAATTCAGGAGCACTACCATAACAGGGCA
AAAACATGGATAGCTGAGCTGATACACACTTACTTTAGGAGTCCATGGACTGCTCTAGCA
TTACTTGCAGCTACTTTCTTGCTTTGCTTGACTTTTACTCAAACCTACTTTACAATAAAT
CCCAATCCCAGATCATGA

Peptide Sequence

PEP ID

XP_016513751.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MEGHTGQQEELFAEIDQKTDDQAFSDGEAASCTTDGNEIVNIVIADPILQADSMPREYTY
SWRRRIQKVLPLLKMDEYNRHEYDPKVVSLGPYHHGKPELQLAEDFKHIALEMFVSGSSK
DVAYFYNKILEVVDNARNCYVDGSTDKYNDHEFSLMMLLDACFIINHIELSTSDRYNKLR
TTRHHLGMLALSTTVRDMFLLENQIPFWILKLLISLRYDKDEGVELLEMFLNFTLFGEYD
KKGEMSYKHAEEPLHLLEAFRTRLVSQHSEVRNLHRTCTPQWLKRKKSICNDRANMKSYI
HSFRSVTDLKAKGIYFRPSCTHSLKDIKFKSRYFYGQLELPTWYVSIYTKAFFLNMIAYE
MCPNTVTDRAVTSYVYFMKSLIESPRDVKELREKQILFNMLGSDEEVARMYKEINTYGVN
NAHIFYNVKEKIQEHYHNRAKTWIAELIHTYFRSPWTALALLAATFLLCLTFTQTYFTIN
PNPRS

Transcript Sequence

Gene sequence data has not been registered.